Diagnostic Performance of an Automated Robot for MALDI Target Preparation in Microbial Identification

dc.contributor.authorPranada, Arthur B.cs
dc.contributor.authorČičatka, Michalcs
dc.contributor.authorHeß, Claracs
dc.contributor.authorKarásek, Jancs
dc.coverage.issue09-2024cs
dc.date.issued2024-09-19cs
dc.description.abstractThe MBT Pathfinder® is an automated colony-picking robot designed for efficient sample preparation in matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry. This article presents results from three key experiments evaluating the instrument's performance in conjunction with MALDI Biotyper® instrument. The method comparison experiment assessed its clinical performance, demonstrating comparable results with Gram-positive, Gram-negative, and anaerobic bacteria (scores larger than 2.00) and superior performance over simple direct yeast transfer (score: 1.80) when compared to samples prepared manually. The repeatability experiment confirmed consistent performance over multiple days and labs (average log score: 2.12, std. deviation: 0.59). The challenge panel experiment showcased its consistent and accurate performance across various samples and settings, yielding average scores between 1.76 and 2.19. These findings underline the MBT Pathfinder® as a reliable and efficient tool for MALDI-TOF mass spectrometry sample preparation in clinical and research applications.en
dc.description.abstractThe MBT Pathfinder® is an automated colony-picking robot designed for efficient sample preparation in matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry. This article presents results from three key experiments evaluating the instrument's performance in conjunction with MALDI Biotyper® instrument. The method comparison experiment assessed its clinical performance, demonstrating comparable results with Gram-positive, Gram-negative, and anaerobic bacteria (scores larger than 2.00) and superior performance over simple direct yeast transfer (score: 1.80) when compared to samples prepared manually. The repeatability experiment confirmed consistent performance over multiple days and labs (average log score: 2.12, std. deviation: 0.59). The challenge panel experiment showcased its consistent and accurate performance across various samples and settings, yielding average scores between 1.76 and 2.19. These findings underline the MBT Pathfinder® as a reliable and efficient tool for MALDI-TOF mass spectrometry sample preparation in clinical and research applications.en
dc.formattextcs
dc.format.extent1-12cs
dc.format.mimetypeapplication/pdfcs
dc.identifier.citationJOURNAL OF CLINICAL MICROBIOLOGY. 2024, issue 09-2024, p. 1-12.en
dc.identifier.doi10.1128/jcm.00434-24cs
dc.identifier.issn0095-1137cs
dc.identifier.orcid0000-0002-8119-6679cs
dc.identifier.other189446cs
dc.identifier.researcheridJDC-4257-2023cs
dc.identifier.scopus58781281100cs
dc.identifier.urihttp://hdl.handle.net/11012/249488
dc.language.isoencs
dc.publisherAmerican Society for Microbiologycs
dc.relation.ispartofJOURNAL OF CLINICAL MICROBIOLOGYcs
dc.relation.urihttps://journals.asm.org/doi/10.1128/jcm.00434-24cs
dc.rightsCreative Commons Attribution 4.0 Internationalcs
dc.rights.accessopenAccesscs
dc.rights.sherpahttp://www.sherpa.ac.uk/romeo/issn/0095-1137/cs
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/cs
dc.subjectagar platesen
dc.subjectsynthetic image generationen
dc.subjectdeep learningen
dc.subjectsemantic segmentationen
dc.subjectagar plates
dc.subjectsynthetic image generation
dc.subjectdeep learning
dc.subjectsemantic segmentation
dc.titleDiagnostic Performance of an Automated Robot for MALDI Target Preparation in Microbial Identificationen
dc.title.alternativeDiagnostic Performance of an Automated Robot for MALDI Target Preparation in Microbial Identificationen
dc.type.driverarticleen
dc.type.statusPeer-revieweden
dc.type.versionpublishedVersionen
sync.item.dbidVAV-189446en
sync.item.dbtypeVAVen
sync.item.insts2025.10.14 14:12:43en
sync.item.modts2025.10.14 09:55:15en
thesis.grantorVysoké učení technické v Brně. Fakulta elektrotechniky a komunikačních technologií. Ústav telekomunikacícs

Files

Original bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
pranadaetal2024diagnosticperformanceofanautomatedrobotformalditargetpreparationinmicrobialidentification.pdf
Size:
1.29 MB
Format:
Adobe Portable Document Format
Description:
file pranadaetal2024diagnosticperformanceofanautomatedrobotformalditargetpreparationinmicrobialidentification.pdf