Methods Of Processing Oxford Nanopore Sequencing Data For Metagenomics

Loading...
Thumbnail Image

Date

Authors

Barilíková, Lujza

Advisor

Referee

Mark

Journal Title

Journal ISSN

Volume Title

Publisher

Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií

ORCID

Abstract

The presented paper describes a new method of processing data produced by revolutionary sequencing technology introduced by Oxford Nanopore Technologies – MinION, which holds a great promise in the field of metagenomics. Low cost, produced long reads and portability, due to its small dimensions, represents only one of the many advantages of this technology. Despite of the benefits, there is a lack of available computational tools for handling the produced data and that is the reason, why a new method of processing such data should be created. In this study such method is created based on dimensionality reduction for data visualization.

Description

Citation

Proceedings of the 24th Conference STUDENT EEICT 2018. s. 116-118. ISBN 978-80-214-5614-3
http://www.feec.vutbr.cz/EEICT/

Document type

Peer-reviewed

Document version

Published version

Date of access to the full text

Language of document

sk

Study field

Comittee

Date of acceptance

Defence

Result of defence

DOI

Endorsement

Review

Supplemented By

Referenced By

Citace PRO