Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms

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dc.contributor.authorVaibarova, Veracs
dc.contributor.authorKrálová, Stanislavacs
dc.contributor.authorPalíková, Miroslavacs
dc.contributor.authorSchwarzerová, Janacs
dc.contributor.authorNejezchlebová, Juliecs
dc.contributor.authorČejková, Darinacs
dc.contributor.authorČížek, Aloiscs
dc.coverage.issue1cs
dc.coverage.volume24cs
dc.date.accessioned2025-04-04T11:56:21Z
dc.date.available2025-04-04T11:56:21Z
dc.date.issued2024-09-18cs
dc.description.abstractThe salmonid pathogen Flavobacterium psychrophilum poses a significant economic threat to global aquaculture, yet our understanding of its genetic and phenotypic diversity remains incomplete across much of its geographic range. In this study, we characterise the genetic and phenotypic diversity of 70 isolates collected from rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta m. fario) from fish farms in the Czech Republic between 2012 and 2019 to compare their genomic content with all draft or complete genomes present in the NCBI database (n=187).en
dc.formattextcs
dc.format.extent1-15cs
dc.format.mimetypeapplication/pdfcs
dc.identifier.citationBMC MICROBIOLOGY. 2024, vol. 24, issue 1, p. 1-15.en
dc.identifier.doi10.1186/s12866-024-03490-3cs
dc.identifier.issn1471-2180cs
dc.identifier.orcid0000-0003-2918-9313cs
dc.identifier.orcid0000-0002-6989-6330cs
dc.identifier.other189681cs
dc.identifier.scopus23099215700cs
dc.identifier.urihttps://hdl.handle.net/11012/250728
dc.language.isoencs
dc.publisherBioMed Centralcs
dc.relation.ispartofBMC MICROBIOLOGYcs
dc.relation.urihttps://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-024-03490-3cs
dc.rightsCreative Commons Attribution-NonCommercial-NoDerivatives 4.0 Internationalcs
dc.rights.accessopenAccesscs
dc.rights.sherpahttp://www.sherpa.ac.uk/romeo/issn/1471-2180/cs
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/cs
dc.subjectFlavobacterium psychrophilumen
dc.subjectGenetic diversityen
dc.subjectAntimicrobial resistanceen
dc.titleGenetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farmsen
dc.type.driverarticleen
dc.type.statusPeer-revieweden
dc.type.versionpublishedVersionen
sync.item.dbidVAV-189681en
sync.item.dbtypeVAVen
sync.item.insts2025.04.04 13:56:21en
sync.item.modts2025.03.31 13:32:05en
thesis.grantorVysoké učení technické v Brně. Fakulta elektrotechniky a komunikačních technologií. Ústav biomedicínského inženýrstvícs
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