Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms
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Date
2024-09-18
Authors
Vaibarova, Vera
Králová, Stanislava
Palíková, Miroslava
Schwarzerová, Jana
Nejezchlebová, Julie
Čejková, Darina
Čížek, Alois
0000-0003-2918-9313Advisor
Referee
Mark
Journal Title
Journal ISSN
Volume Title
Publisher
BioMed Central
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Abstract
The salmonid pathogen Flavobacterium psychrophilum poses a significant economic threat to global aquaculture, yet our understanding of its genetic and phenotypic diversity remains incomplete across much of its geographic range. In this study, we characterise the genetic and phenotypic diversity of 70 isolates collected from rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta m. fario) from fish farms in the Czech Republic between 2012 and 2019 to compare their genomic content with all draft or complete genomes present in the NCBI database (n=187).
Description
Citation
BMC MICROBIOLOGY. 2024, vol. 24, issue 1, p. 1-15.
https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-024-03490-3
https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-024-03490-3
Document type
Peer-reviewed
Document version
Published version
Date of access to the full text
Language of document
en
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Date of acceptance
Defence
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Document licence
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
http://creativecommons.org/licenses/by-nc-nd/4.0/