Operon identifier: Identification of operon structures in the whole genome
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Date
2022
Authors
Nejezchlebová, Julie
Schwarzerová, Jana
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Mark
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Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií
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Abstract
Currently, operon prediction is based on the distance of neighboring genes on the functional relationships of their products that encode proteins in a given nucleotide sequence, or on ORF distances. This study deals with the design of a new function that detects operon structures based on information from gene expression or alternatively in combination with previous information from current online available tools. The function was implemented in Python language and tested on Clostridium beijerinckii NRRL B-598. This bacterium has huge potential in biotechnology and research due to its fermentation product, butanol.
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Citation
Proceedings II of the 28st Conference STUDENT EEICT 2022: Selected papers. s. 80-83. ISBN 978-80-214-6030-0
https://conf.feec.vutbr.cz/eeict/index/pages/view/ke_stazeni
https://conf.feec.vutbr.cz/eeict/index/pages/view/ke_stazeni
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Peer-reviewed
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en
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© Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií