MHC And KIR Genotyping Of Macaques In HIV Infection Research

Matula, Jan

MHC And KIR Genotyping Of Macaques In HIV Infection Research

but.event.date	27.04.2017	cs
but.event.title	Student EEICT 2017	cs
dc.contributor.author	Matula, Jan
dc.date.accessioned	2020-05-07T09:40:24Z
dc.date.available	2020-05-07T09:40:24Z
dc.date.issued	2017	cs
dc.description.abstract	Modern research of viral diseases relies on genomic data processing. Not only is the sequence of a virus important, genomic sequence of specific receptors in affected organisms also plays an important role. In this paper, a novel package for processing of next generation sequencing data in infectious disease written using R/Bioconductor language is proposed. Functionality of the package, including implementation of advanced SSAHA algorithm for fast database searches, in demonstrated using genotyping of genes for MHC and KIR receptors of HIV positive macaques.	en
dc.format	text	cs
dc.format.extent	27-29	cs
dc.format.mimetype	application/pdf	en
dc.identifier.citation	Proceedings of the 23st Conference STUDENT EEICT 2017. s. 27-29. ISBN 978-80-214-5496-5	cs
dc.identifier.isbn	978-80-214-5496-5
dc.identifier.uri	http://hdl.handle.net/11012/187026
dc.language.iso	cs	cs
dc.publisher	Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií	cs
dc.relation.ispartof	Proceedings of the 23st Conference STUDENT EEICT 2017	en
dc.relation.uri	http://www.feec.vutbr.cz/EEICT/	cs
dc.rights	© Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií	cs
dc.rights.access	openAccess	en
dc.subject	Roche 454	en
dc.subject	SSAHA	en
dc.subject	sequencing	en
dc.subject	demultiplexing	en
dc.subject	hash table	en
dc.subject	HIV	en
dc.subject	genotyping	en
dc.title	MHC And KIR Genotyping Of Macaques In HIV Infection Research	en
dc.type.driver	conferenceObject	en
dc.type.status	Peer-reviewed	en
dc.type.version	publishedVersion	en
eprints.affiliatedInstitution.department	Fakulta elektrotechniky a komunikačních technologií	cs

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